The Full-text Index Data structure library, libfid for short, is a portable software library for accessing indexed data through a simple C interface. It implements, among others, functions for reading indexed data from files, and for performing common operations such as fast string matching. Easy alphabet handling for mapping between printable and binary alphabets is integrated from the ground up. Currently, the enhanced suffix array is the only full-text index data structure supported. A very simplistic program for constructing enhanced suffix arrays is included.
mkESA is a program for constructing enhanced suffix arrays (ESAs) from biological sequence data. The program is based on an implementation of Manzini's lightweight Deep-Shallow algorithm, which can also utilize multiple CPUs/cores for extra performance. The generated output is compatible with the output of mkvtree from the Vmatch package.
ESKit is a portable C library that provides implementations of some self-adaptive evolution strategies. It features a simple API, comprehensive documentation, three state of the art self-adaptive evolution strategies (Isotropic CSA-ES, CMA-ES, and Separable CMA-ES), and can optionaly uses LAPACK. The implementation strictly follows the published papers introducing those evolution strategies and performs as in the published papers. A basic benchmark program is provided.
Eero is a binary-compatible variant of Objective-C 2.0, implemented with a patched version of the Clang/LLVM compiler. It features a streamlined syntax with improved readability and reduced code clutter, as well as new features such as Python-like indentation and a limited form of operator overloading. It is inspired by languages such as Smalltalk and Ruby.